Microbial metagenomics, metatranscriptomics, and metaproteomics

Microbial metagenomics, metatranscriptomics, and metaproteomics

Enregistré dans:
Détails bibliographiques
Autres auteurs : Delong Edward F. (Éditeur scientifique)
Format : Livre
Langue : anglais
Titre complet : Microbial metagenomics, metatranscriptomics, and metaproteomics / edited by Edward F. DeLong
Publié : Amsterdam : Elsevier B. V. , 2013, cop. 2013
Collection : Methods in enzymology (Online) ; 531
Accès en ligne : Accès Nantes Université
Sujets :
Métagénomique
Protéomique
Documents associés : Autre format: Microbial metagenomics, metatranscriptomics, and metaproteomics
  • Section I : Preparation and Genomic Analyses of Single Cells from Natural Populations
  • Chap. 1. In-Solution Fluorescence In Situ Hybridization and Fluorescence-Activated Cell Sorting for Single Cell and Population Genome Recovery
  • Chap. 2. Whole Cell Immunomagnetic Enrichment of Environmental Microbial Consortia Using rRNA-Targeted Magneto-FISH
  • Chap. 3. Coupling FACS and Genomic Methods for the Characterization of Uncultivated Symbionts
  • Chap. 4. Optofluidic Cell Selection from Complex Microbial Communities for Single-Genome Analysis
  • Chap. 5. Quantifying and Identifying the Active and Damaged Subsets of Indigenous Microbial Communities
  • Section II : Microbial Community Genomics Sampling, Metagenomic Library Preparation, and Analysis
  • Chap. 6. Preparation of BAC Libraries from Marine Microbial Populations
  • Chap. 7. Preparation of Fosmid Libraries and Functional Metagenomic Analysis of Microbial Community DNA
  • Chap. 8. Preparation of Metagenomic Libraries from Naturally Occurring Marine Viruses
  • Section III : Microbial Community Transcriptomics Sample Preparation, cDNA Library Construction, and Analysis
  • Chap. 9. Preparation and Metatranscriptomic Analyses of Host Microbe Systems
  • Chap. 10. Preparation of Microbial Community cDNA for Metatranscriptomic Analysis in Marine Plankton
  • Chap. 11. Sequential Isolation of Metabolites, RNA, DNA, and Proteins from the Same Unique Sample
  • Chap. 12. Use of Internal Standards for Quantitative Metatranscriptome and Metagenome Analysis
  • Chap. 13. Sample Processing and cDNA Preparation for Microbial Metatranscriptomics in Complex Soil Communities
  • Section IV : Microbial Community Proteomics Sampling, Sample Preparation, Spectral Analysis, and Interpretation
  • Chap. 14. Sample Preparation and Processing for Planktonic Microbial Community Proteomics
  • Chap. 15. Sample Handling and Mass Spectrometry for Microbial Metaproteomic Analyses
  • Chap. 16. Molecular Tools for Investigating Microbial Community Structure and Function in Oxygen-Deficient Marine Waters
  • Section V : Microbial Community Informatics: Computational Platforms, Comparative Analyses, and Statistics
  • Chap. 17. Assembling Full-Length rRNA Genes from Short-Read Metagenomic Sequence Datasets Using EMIRGE
  • Chap. 18. Computational Methods for High-Throughput Comparative Analyses of Natural Microbial Communities
  • Chap. 19. Advancing Our Understanding of the Human Microbiome Using QIIME
  • Chap. 20. Disentangling Associated Genomes
  • Chap. 21. Microbial Community Analysis Using MEGAN
  • Chap. 22. A Metagenomics Portal for a Democratized Sequencing World
  • Chap. 23. A User s Guide to Quantitative and Comparative Analysis of Metagenomic Datasets